Proteomics Data

  • -400 strain high throughput proteomics data, zip file containing the following:
    • PeptideDatafromMultialign051908.csv = all the peptide data you can take into DANTE and mess around with.
    • ClusterMap.ppt = visual of 340 significantly changed proteins with p-value 0.01 or less from a t-test.
    • FinalOrder.txt = data used in MeV to get the picture in ClusterMap.ppt
    • Dante.dnt = my dante file for the log2 transform, Rrollup, and linear regression
    • SignificantlyChangedProteins_pvalues.txt = T-test output for significantly changed proteins.
    • SignificantlyChangedProteins_pvaluesWithRatios.csv = same as SignificantlyChangedProteins_pvalues.txt, but with fold ratios included